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Fluctuate

Jul 20, 2023

Program to fit population models

Fluctuate fits the model which has a single population which has been growing or shrinking according to an exponential growth law. It estimates 4Nu and g, where N is the effective population size, u is the neutral mutation rate per site, and g is the growth rate of the population.

Fluctuate forms part of the Lamarc Likelihood Analysis with Metropolis Algorithm using Random Coalescence suite. See

http//evolution.genetics.washington.edu/lamarc.html

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