Pycogent

Toolkit for statistical analysis of biological sequences

PyCogent is a software library for genomic biology. It is a fully integrated and thoroughly tested framework for controlling third-party applications; devising workflows; querying databases; conducting novel probabilistic analyses of biological sequence evolution; and generating publication quality graphics. It is distinguished by many unique built-in capabilities such as true codon alignment and the frequent addition of entirely new methods for the analysis of genomic data.

WWW http//pycogent.sourceforge.net/