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Sim4

May 26, 2018

Algorithm for aligning expressed DNA with genomic sequences

This package implements the Sim4 algorithm for aligning expressed DNA with genomic sequences, described in the paper

L. Florea, G. Hartzell, Z. Zhang, G. Rubin, and W. Miller 1998 “A computer program for aligning a cDNA sequence with a genomic DNA sequence.” Genome Research 8, 967-974.

WWW http//globin.cse.psu.edu/

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