Coot

Jul 20, 2023

Crystallographic Object-Oriented Toolkit

Coot is for macromolecular model building, model completion and validation, particularly suitable for protein modelling using X-ray data.

Coot displays maps and models and allows model manipulations such as idealization, real space refinement, manual rotation/translation, rigid-body fitting, ligand search, solvation, mutations, rotamers, Ramachandran plots, skeletonization, non-crystallographic symmetry and more.

WWW https//www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/



Checkout these related ports:
  • Zx - MQT ZX A library for working with ZX-diagrams
  • Zotero - Reference management for bibliographic data and research materials
  • Yoda - Particle physics package with classes for data analysis, histogramming
  • Xtb - Semiempirical Extended Tight-Binding Program Package
  • Xmakemol - Molecule Viewer Program Based on Motif Widget
  • Xdrawchem - Two-dimensional molecule drawing program
  • Xcrysden - Crystalline and molecular structure visualisation program
  • Xcfun - Exchange-correlation functionals with arbitrary-order derivatives
  • Wxmacmolplt - Graphical user interface principally for the GAMESS program
  • Wwplot - Plotting tool for experimental physics classes
  • Wannier90 - Maximally-localized Wannier functions (MLWFs) and Wannier90
  • Votca - CSG and XTP libraries for atomistic simulations
  • Voro++ - Three-dimensional computations of the Voronoi tessellation
  • Vmd - Molecular visualization program
  • Vipster - Crystalline and molecular structure visualisation program