cdbfasta
2023.07.10Fast indexing and retrieval of FASTA records from flat file databases
Cdbfasta creates an index file for a multi-FASTA file to facilitate fast retrieval of any sequence using cdbyank.
Origin: biology/cdbfasta
Category: biology
Size: 193KiB
License: ART20
Maintainer: jwb@FreeBSD.org
Dependencies: 0 packages
Required by: 0 packages
Website: github.com/gpertea/cdbfasta
$
pkg install cdbfastaMore in biology
htslib1.22
C library for high-throughput sequencing data formatsp5-BioPerl1.007008
Collection of Perl modules for bioinformaticssamtools1.22
Tools for manipulating next-generation sequencing databiolibc0.2.7
Low-level high-performance bioinformatics librarybcftools1.22
Tools for manipulating next-generation sequencing databedtools2.31.1
Toolset for genome set arithmetic such as intersect, unionfastqc0.12.1
Quality control tool for high throughput sequence datasra-tools3.3.0_2
NCBI's toolkit for handling data in INSDC Sequence Read Archivesbwa0.7.19
Burrows-Wheeler sequence alignerlibsbml5.20.5_1
API Library for Working with SBML File