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coverm

0.7.0_11

Read coverage calculator for metagenomics

CoverM aims to be a configurable, easy to use and fast DNA read coverage and relative abundance calculator focused on metagenomics applications. CoverM calculates coverage of genomes/MAGs `coverm genome` or individual contigs `coverm contig`. Calculating coverage by read mapping, its input can either be BAM files sorted by reference, or raw reads and reference genomes in various formats.

Origin: biology/coverm
Category: biology
Size: 4.79MiB
License: AGPLv3
Maintainer: yuri@FreeBSD.org
Dependencies: 0 packages
Required by: 0 packages
Website: github.com/wwood/CoverM
$pkg install coverm

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