htslib

1.22

C library for high-throughput sequencing data formats

HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM, CRAM, VCF, and BCF, used for high-throughput sequencing data. It is the core library used by samtools and bcftools.

Origin: biology/htslib

Category: biology

Size: 7.05MiB

License: BSD3CLAUSE, MIT

Maintainer: jwb@FreeBSD.org

Dependencies: 2 packages

Required by: 17 packages

Website: www.htslib.org

$pkg install htslib

Dependencies (2)

libdeflate curl

Required By (17 packages)

Jellyfish augustus-gene-prediction bcf-score bcftools bio-mocha cufflinks freebayes kallisto mashmap pbbam preseq py311-pysam rna-STAR samtools tabixpp vcflib vt

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