kmcp
0.9.4_22Accurate metagenomic profiling & fast large-scale genome searching
KMCP: accurate metagenomic profiling of both prokaryotic and viral populations by pseudo-mapping. See also: https://github.com/shenwei356/kmcp
Origin: biology/kmcp
Category: biology
Size: 11.2MiB
License: MIT
Maintainer: yuri@FreeBSD.org
Dependencies: 0 packages
Required by: 0 packages
Website: bioinf.shenwei.me/kmcp
$
pkg install kmcpMore in biology
htslib1.22
C library for high-throughput sequencing data formatsp5-BioPerl1.007008
Collection of Perl modules for bioinformaticssamtools1.22
Tools for manipulating next-generation sequencing databiolibc0.2.7
Low-level high-performance bioinformatics librarybcftools1.22
Tools for manipulating next-generation sequencing databedtools2.31.1
Toolset for genome set arithmetic such as intersect, unionfastqc0.12.1
Quality control tool for high throughput sequence datasra-tools3.3.0_2
NCBI's toolkit for handling data in INSDC Sequence Read Archivesbwa0.7.19
Burrows-Wheeler sequence alignerlibsbml5.20.5_1
API Library for Working with SBML File