p5-BioPerl-Run

1.007003

Wrapper modules for common bioinformatics tools

Bioperl-run contain modules that provides a PERL interface to various bioinformatics applications. This allows various applications to be used with common Bioperl objects.

Origin: biology/p5-BioPerl-Run

Category: biology

Size: 1.66MiB

License: ART10, GPLv1+

Maintainer: sunpoet@FreeBSD.org

Dependencies: 10 packages

Required by: 0 packages

Website: github.com/bioperl/bioperl-run

$pkg install p5-BioPerl-Run

Dependencies (10)

perl5 p5-XML-Twig p5-IPC-Run p5-IO-String p5-File-Sort p5-Config-Any p5-BioPerl p5-Bio-FeatureIO p5-Bio-Cluster p5-Algorithm-Diff

More in biology

htslib1.22

C library for high-throughput sequencing data formats

p5-BioPerl1.007008

Collection of Perl modules for bioinformatics

samtools1.22

Tools for manipulating next-generation sequencing data

biolibc0.2.7

Low-level high-performance bioinformatics library

bcftools1.22

Tools for manipulating next-generation sequencing data

bedtools2.31.1

Toolset for genome set arithmetic such as intersect, union

fastqc0.12.1

Quality control tool for high throughput sequence data

sra-tools3.3.0_2

NCBI's toolkit for handling data in INSDC Sequence Read Archives

bwa0.7.19

Burrows-Wheeler sequence aligner

libsbml5.20.5_1

API Library for Working with SBML File