FreeBSD.software

science

Scientific computing and research tools

511 packages

This page covers 2d-rewritermadness. Search all 511 packages →

Browse the complete collection of 511 FreeBSD science packages available in the ports tree. Every package can be installed with a single pkg install command. The most popular packages in this category include py311-scipy, hdf5, py311-scikit-learn. We have 2 guides covering science software on FreeBSD.

All Packages

150 results
2d-rewriter1.6_1
Cellular automata simulator
abinit10.4.7
Full-featured atomic-scale first-principles simulation software2 rdeps
acados0.4.3
Fast and embedded solvers for nonlinear optimal control
afni26.0.00
Advanced Functional Neuro Imaging
agrum2.3.0_1
Graphical modeler for Bayesian networks, influence diagrams, etc
aircraft-datcom0.0.20120723_6
Modified USAF Aircraft Stability and Control Data Compendium
ALPSCore2.3.2
Generic algorithms and utilities for condensed matter physics
antioch0.4.0.156_14
C++ Chemical Kinetics, Thermodynaimics, and Transport Library
apbs1.5.102
Electrostatic and solvation properties for complex molecules
arbor0.11.0_1
Multi-compartment neural network simulation library1 rdeps
ascent-visualizer0.9.5_1
Visualization and analysis runtime for multi-physics HPC simulations1 rdeps
atompaw4.2.0.3_3
Tool for projector augmented wave functions for molecular simulations1 rdeps
avogadro21.100.0
Chemical editor and visualization application
avogadrolibs1.100.0_1
Avogadro2 libraries for chemical editor and visualization applications3 rdeps
axom0.10.1_3
Infrastructure for development of multi-physics applications and tools1 rdeps
bagel1.2.2.132_17
Brilliantly Advanced General Electronic-structure Library
bddsolve1.04_20
BDD-based satisfiability and reachability solver
BerkeleyGW4.0_2
Scientific program aimed at the ab initio virtual experimentation
bodr10
Chemistry data like element and isotope properties, atomic radii, etc1 rdeps
bout++5.1.1_5
Plasma fluid finite-difference simulation code
buddy2.4_2
Binary Decision Diagram library2 rdeps
cantera3.1.0_4
Chemical kinetics, thermodynamics, and transport tool suite
cardioidg20211026_4
Cardiac simulation toolkit
cdf33.9.1_1
Device independent view of the CDF data model1 rdeps
cdk-chemistry2.7.1
Chemistry Development Kit
cdo2.5.4_1
Climate Data Operators2 rdeps
cgnslib4.5.1,1
CFD General Notation System library code4 rdeps
cgribex2.0.0_1
Lightweight GRIBEX in C with portable Fortran interface1 rdeps
checkmol0.5_18
Analyze molecules for the presence of functional groups
chemical-mime-data0.1.94_12
Collection of chemical MIME types for UNIX desktops2 rdeps
chemicalfun0.1.8_4
C++ library for working with chemical reactions and formulas1 rdeps
CheMPS21.8.12_6
Spin-adapted implementation of DMRG for ab initio quantum chemistry
chemtool1.6.14_5
Draw organic molecules easily and store them
chemtool-devel1.7.20050716_13
Drawing organic molecules easily and store them (developer version)
chimes-calculator1.0.2_1
Chebyshev Interaction Model for Efficient Simulation1 rdeps
ChipmunkPhysics7.0.1_2
2D physics engine written in C
chrono-physics-simulation-engine9.0.1_3
C++ library for multi-physics simulation
clhep2.4.7.2
Object-oriented toolkit for particle physics applications by CERN1 rdeps
clipper2.1.20180802_5
Libraries for the organisation of crystallographic data
code_saturne8.1.1_5
EDF's general purpose Computational Fluid Dynamics (CFD) software
colt1.2.0_2
Java package for scalable scientific and technical computing
conduit0.9.5_1
Simplified data exchange for HPC simulations4 rdeps
coordgenlibs3.0.2
Schrodinger-developed 2D coordinate generation1 rdeps
cp2k2025.2
Quantum chemistry and solid state physics software package
cp2k-data2025.2
Data for cp2k quantum chemistry package1 rdeps
cpcmx1.1.0
Extended conductor-like polarizable continuum solvation model
csvtk0.36.0_3
Cross-platform and ultrafast toolkit for CSV/TSV processing1 rdeps
dakota6.22.0_1
Interface between analysis codes & iterative systems analysis methods
dalton2020.0_6
Powerful molecular electronic structure program for quantum chemistry
dd_package2.2.0
MQT decision diagram package tailored to quantum computing
devisor2.1_3
Design and Visualization Software Resource for FeatFlow
dftbplus24.1_5
DFTB+: Package for performing fast atomistic simulations1 rdeps
dftd33.2.0.3_1
S. Grimme's dispersion correction for DFT, Hartree-Fock methods
dftd43.7.0.31
Atomic-charge dependent london dispersion correction computation1 rdeps
dimod0.12.21
DWave: Shared API for QUBO/Ising samplers1 rdeps
dirac-quantum-chemistry-software22.0_3
Program for atomic & molecular relativistic all-electron calculations1 rdeps
dkh1.2_6
Wolf, Reiher, and Hess's Douglas-Kroll-Hess relativistic correction
dlib-cpp20.0_1
Machine learning framework written in C++2 rdeps
DRAWxtl5.5_1
Crystal structure visualization tool
dssp4.4.11_2
Application to assign secondary structure to proteins
dwave-preprocessing0.6.5
DWave: Preprocessing tools to aid in solving binary quadratic models
dynare5.4_14
Software platform for handling a wide class of economic models
eccodes2.44.0
ECMWF API for WMO FM-92 GRIB and FM-94 BUFR messages4 rdeps
elk-chemistry10.3.12_3
All-electron full-potential linearised augmented-planewave code
epte2.0.8_2
Electronic Periodic Table of the Elements
erd3.0.6_6
AcesIII electron repulsion integrals
ergo3.8.2_2
Quantum chemistry program for large-scale atomic calculations
erkaleg20220405_10
Quantum chemistry program to solve the electronic structure of atoms
erkale-pseudopotentialsg20220405
Pseudopotentials for Erkale, the quantum chemistry program2 rdeps
erkale-serialg20220405_10
Quantum chemistry program to solve the electronic structure of atoms
fasthenry3.0.w.021113_1
Multipole-accelerated inductance analysis program
fastjet3.5.1
Package for jet finding in pp and e+e- collisions
feff1010.0.0.16_1
Ab initio scattering calculations of X-ray absorption fine structure
fleur7.2_4
FLAPW code for atomic computations in quantum chemistry and physics
FrontISTR5.2_6
Large-Scale Parallel FEM Program for Nonlinear Structural Analysis
fsomg20151117_2
Tiny C library for managing SOM (Self-Organizing Maps) neural networks
gabedit2.5.1.300720_2
Graphical user interface for several chemistry software packages
gbtolib3.0.3_5
High-performance library for evaluation of molecular integrals1 rdeps
gchemutils0.14.17_5
C++ classes and Gtk3 widgets related to chemistry
gcp2.3.2
Geometrical Counter-Poise Correction
gdma2.2.6_6
Anthony Stone's Gaussian Distributed Multipole Analysis
geant411.3.2
Simulate the passage of particles through matter
gemmi0.7.3
Macromolecular crystallography library and utilities1 rdeps
getdp3.6.0_1
Rather general finite element solver using mixed finite elements1 rdeps
ghemical3.0.0_29
Computational chemistry software package
ghmm0.9.r3_3
General Hidden Markov Model Library in C
gnudatalanguage1.1.3
Free IDL-compatible incremental compiler
gpaw-setups0.9.20000
Setups (data files) for py-gpaw, the DFT quantum chemistry software1 rdeps
gramps6.0.6
GTK3-based genealogy program
gromacs2025.4_1
Compute molecular dynamics1 rdeps
gsmc1.1_7
Smith chart program for impedance matching
h5utils1.13.2_4
Set of utilities for visualization and conversion of HDF5 format
h5z-zfp1.1.1
Registered ZFP compression plugin for HDF5
harminv1.4.2_2
Solver of harmonic inversion1 rdeps
hdf4.3.0,1
Hierarchical Data Format library (from NCSA)2 rdeps
hdf51.12.2_2,1
Hierarchical Data Format library (from NCSA) (latest)87 rdeps
hdf5-1101.10.11
Hierarchical Data Format library (from NCSA) 1.10.x1 rdeps
hdf5-181.8.23
Hierarchical Data Format library (from NCSA) 1.8
healpix3.50_6
Software for pixelization, visualization, etc of data on the sphere2 rdeps
healpix-c3.50_6
Software for pixelization, visualization, etc of data on the sphere
helfemg20251026
Finite element methods for electronic structure calculations
hepmc33.3.0
Event record for High Energy Physics Monte Carlo generators/simulation1 rdeps
highfive3.3.0
Header-only C++ HDF5 interface
hypre2.33.0_1
Scalable Linear Solvers and Multigrid Methods4 rdeps
iboview20150427_28
Program for analyzing molecular electronic structure
InsightToolkit5.3.0_9
Insight Toolkit3 rdeps
InsightToolkit5015.0.1_3
Insight Toolkit1 rdeps
isaac4.2_17
Integrated Solution Algorithm for Arbitrary Configuration
jdftx1.7.0_6
Software for joint density functional theory in chemistry
Jmol16.1.25_1
Java 3D viewer for chemical structures
kalzium25.12.1
Periodic table of elements for KDE1 rdeps
kim-api2.4.1
Framework for reliable, reproducible, portable molecular simulations3 rdeps
kplib1.1.1
Library for finding optimal Generalized Monkhorst-Pack k-points grid
kst2.1
Data viewing and plotting tool
lammps20241119_3
Classical molecular dynamics code with a focus on materials modeling
lamprop2020.12.28
Calculates properties of fiber reinforced composites
latte1.2.2_6
Quantum chemistry: Density functional tight binding molecular dynamics1 rdeps
libaec1.1.4
Adaptive entropy coding library41 rdeps
libccp48.0.0
Protein X-ray crystallography toolkit2 rdeps
libcifpp7.0.8_3
Library to manipulate mmCIF and PDB files1 rdeps
libcint6.1.3
General GTO integrals for quantum chemistry1 rdeps
libctl4.5.0_5
Control Language Library2 rdeps
libecpint1.0.7
Library for the evaluation of integrals over effective core potentials1 rdeps
libefp1.5.0
Effective fragment potential method in quantum chemistry
libgetar1.1.7
Library to read and write GEneric Trajectory ARchives
libghemical3.0.0_21
Support libraries of science/ghemical port1 rdeps
libgridxc2.0.2
Library to compute the exchange and correlation energy and potentials
libint1.2.1.15
Evaluate the integrals in modern atomic and molecular theory5 rdeps
libint22.11.0_2
Evaluate the integrals in modern atomic and molecular theory1 rdeps
libint2-psi40.1.2.7.2_6
Evaluate the integrals in modern atomic and molecular theory (psi4)1 rdeps
libkml1.3.0_31
Reference implementation of OGC KML 2.21 rdeps
liblinear2.49
Library for Large Linear Classification
libmbd0.12.5_4
Many-body dispersion library2 rdeps
libmsym0.2.3
Molecular point group symmetry library2 rdeps
libnegf1.1.3_4
Non Equilibrium Green's Functions library1 rdeps
liboglappth1.0.0_5
Support libraries of science/ghemical port1 rdeps
libpsml2.1.0
Library to handle pseudopotentials in PSML format
libquantum1.1.1_1
C library for quantum computing and quantum simulation
libssm1.4.0_4
C++ toolkit for superposition of macromolecules
libsvm3.24
Library for Support Vector Machines2 rdeps
libsvm-python3.24_1
Library for Support Vector Machines
libvdwxc0.4.6.20190510
Van der Waals density functional (DFT) library1 rdeps
libxc6.2.2
Library of exchange-correlation functionals for DFT18 rdeps
liggghts3.8.0.58_7
Discrete element method particle simulation software
LinearElasticity1.0.0
Elas, a solver for linear elasticity1 rdeps
linux-ai-ml-env1.0.2
Linux Python environment for running Stable Diffusion models and PyTorch CUDA examples
linux-zotero6.0.10_2
Reference management for bibliographic data and research materials
luscus0.8.6_4
Molecular editor and viewer
m-aneos1.0.1_1
M-ANEOS: program for construction of thermodynamic equations of state
madness0.10.1.20180823_17
Multiresolution adaptive numeric environment for scientific simulation