RECENT POSTS

science

May 26, 2018

  • 2d-rewriter - Cellular automata simulator
  • Alpscore - Generic algorithms and utilities for condensed matter physics
  • Insighttoolkit - Insight Toolkit
  • Moose-neural-simulator - Multiphysics Object Oriented Simulation Environment
  • Petsc - Suite of data structures and routines from Argonne National Laboratory
  • R-cran-amore - MORE flexible neural network package
  • R-cran-dcluster - Functions for the detection of spatial clusters of diseases
  • R-cran-epi - Package for statistical analysis in epidemiology
  • R-cran-bayesm - Bayesian Inference for Marketing/Micro-econometrics
  • R-cran-cmprsk - Subdistribution Analysis of Competing Risks
  • R-cran-e1071 - Misc Functions of the Department of Statistics (e1071), TU Wien
  • R-cran-eco - R Package for Ecological Inference in 2x2 Tables
  • R-cran-epicalc - Epidemiological calculator
  • R-cran-etm - Empirical Transition Matrix
  • R-cran-fastica - FastICA Algorithms to Perform ICA and Projection Pursuit
  • R-cran-kernlab - Kernel-Based Machine Learning Lab
  • R-cran-snow - Support for simple parallel computing in R
  • R-cran-som - Self-Organizing Map
  • R-cran-udunits2 - Udunits-2 Bindings for R
  • Afni - Advanced Functional Neuro Imaging
  • Aircraft-datcom - Modified USAF Aircraft Stability and Control Data Compendium
  • Antioch - C++ Chemical Kinetics, Thermodynaimics, and Transport Library
  • Avogadro - Advanced molecular editor and viewer
  • Bddsolve - BDD-based satisfiability and reachability solver
  • Bft - Code_Saturne Base Functions and Types library
  • Bodr - Chemistry data like element and isotope properties, atomic radii, etc
  • Brian - Clock-driven simulator for spiking neural networks
  • Buddy - Binary Decision Diagram library
  • Cdcl - Scientific graphic library for geoscience
  • Cdf - Device independent view of the CDF data model
  • Cdo - Climate Data Operators
  • Cgnslib - CFD General Notation System library code
  • Cgribex - Lightweight GRIBEX in C with portable Fortran interface
  • Checkmol - Analyze molecules for the presence of functional groups
  • Chemical-mime-data - Collection of chemical MIME types for UNIX desktops
  • Chemps2 - Spin-adapted implementation of DMRG for ab initio quantum chemistry
  • Chemtool-devel - Drawing organic molecules easily and store them (developer version)
  • Chemtool - Draw organic molecules easily and store them
  • Clhep - Object-oriented toolkit for particle physics applications by CERN
  • Colt - Java package for scalable scientific and technical computing
  • Crf++ - Yet Another CRF toolkit
  • Dcl - Scientific graphic library for geoscience
  • Devisor - Design and Visualization Software Resource for FeatFlow
  • Dkh - Wolf, Reiher, and Hess's Douglas-Kroll-Hess relativistic correction
  • Dlib-cpp - Machine learning framework written in C++
  • Dlpoly-classic - Molecular dynamics simulation package
  • Ecs - Code_Saturne Preprocessor
  • Epte - Electronic Periodic Table of the Elements
  • Erd - AcesIII electron repulsion integrals
  • Fastcap - Three-dimensional capacitance extraction program
  • Fasthenry - Multipole-accelerated inductance analysis program
  • Fisicalab - Physics simulation program for educational use
  • Fsom - Tiny C library for managing SOM (Self-Organizing Maps) neural networks
  • Fvcom-mpi -
  • Fvcom - Unstructured Grid Finite Volume Coastal Ocean Model
  • Fvm - Code_Saturne Finite Volume Mesh
  • Gchemutils - C++ classes and Gtk3 widgets related to chemistry
  • Gdma - Anthony Stone's Gaussian Distributed Multipole Analysis
  • Getdp - Rather general finite element solver using mixed finite elements
  • Ghemical - Computational chemistry software package
  • Ghmm - General Hidden Markov Model Library in C
  • Gnudatalanguage -
  • Gramps - GTK3-based genealogy program
  • Grib_api - ECMWF API for WMO FM-92 GRIB messages
  • Gromacs - Compute molecular dynamics
  • Gsmc - Smith chart program for impedance matching
  • Gtamsanalyzer - Qualitative Research Software for the Free World for GNUstep
  • Gwyddion - Gtk2 based SPM data visualization and analysis tool
  • H5utils - Set of utilities for visualization and conversion of HDF5 format
  • Harminv - Solver of harmonic inversion
  • Hdf - Hierarchical Data Format library (from NCSA)
  • Hdf5-18 - Hierarchical Data Format library (from NCSA) 1.8
  • Hdf5 - Hierarchical Data Format library (from NCSA)
  • Hs-bio - Bioinformatics library
  • Hypre - Scalable Linear Solvers and Multigrid Methods
  • Iboview - Program for analyzing molecular electronic structure
  • Isaac-cfd - Integrated Solution Algorithm for Arbitrary Configuration
  • Jstrack - Freeware hurricane tracking program
  • Kalzium-kde4 - Periodic table of elements for KDE 4
  • Kalzium - Periodic table of elements for KDE 4
  • Kst2 - Data viewing and plotting tool
  • Lamprop - Calculates properties of fiber reinforced composites
  • Libaec - Adaptive entropy coding library
  • Libcint - General GTO integrals for quantum chemistry
  • Libctl - Control Language Library
  • Libefp - Effective fragment potential method in quantum chemistry
  • Libgeodecomp -
  • Libghemical - Support libraries of science/ghemical port
  • Libint - Evaluate the integrals in modern atomic and molecular theory
  • Libkml - Reference implementation of OGC KML 2.2
  • Liblinear - Library for Large Linear Classification
  • Liboglappth - Support libraries of science/ghemical port
  • Libquantum - C library for quantum computing and quantum simulation
  • Libsvm-python -
  • Libsvm - Library for Support Vector Machines
  • Libxc - Library of exchange-correlation functionals for DFT
  • Linsmith - Smith charting program
  • Massxpert -
  • Mbdyn - MultiBody Dynamics analysis system
  • Mcstas-comps - Component Library for the McStas neutron ray tracing package
  • Mcstas - Monte Carlo neutron ray tracing package
  • Mcxtrace-comps - Component Library for the McXtrace X-ray tracing package
  • Mcxtrace - Monte Carlo X-ray tracing package
  • Medit - Interactive meshes visualization
  • Meep - FDTD simulation software to model electromagnetic systems
  • Mei - Code_Saturne Mathematical Expression Interpreter
  • Metaf2xml - Parse and Decode METAR, TAF, SYNOP, BUOY and AMDAR and Write as XML
  • Metaphysicl - Metaprogramming, operator-overloaded classes for numerical simulations
  • Minc2 - Medical Imaging NetCDF
  • Mol2ps - Read molecular structure files and generate Postscript output
  • Mpb - MIT Photonic-Bands
  • Mpqc-mpich -
  • Ncs - Code_Saturne Kernel
  • Netcdf-cxx - C++ library for machine-independent, array-oriented data access
  • Netcdf-fortran - Fortran library for machine-independent, array-oriented data access
  • Netcdf - C library for machine-independent, array-oriented data access
  • Nifticlib - Neuroimaging Informatics Technology Initiative data format
  • Openbabel - Chemistry file translation program
  • Openkim - Knowledgebase of Interatomic Models
  • Orthanc-dicomweb - WADO and DICOMweb support for Orthanc
  • Orthanc-postgresql - PostgreSQL plugin for Orthanc
  • Orthanc-webviewer - Web viewer plugin for Orthanc
  • Orthanc - RESTful DICOM server for healthcare and medical research
  • P5-algorithm-svmlight - Perl interface to SVMLight Machine-Learning Package
  • P5-chemistry-3dbuilder - Generate 3D coordinates from a connection table
  • P5-chemistry-bond-find - Detect bonds in a molecule and assign formal bond orders
  • P5-chemistry-canonicalize - Number the atoms in a molecule in a unique way
  • P5-chemistry-elements - Perl extension for working with Chemical Elements
  • P5-chemistry-file-mdlmol - MDL molfile reader/write
  • P5-chemistry-file-mopac - MOPAC 6 input file reader/writer
  • P5-chemistry-file-pdb - Perl module to read and write PDB files
  • P5-chemistry-file-sln - SLN linear notation parser/writer
  • P5-chemistry-file-smarts - SMARTS chemical substructure pattern linear notation parser
  • P5-chemistry-file-smiles - SMILES linear notation parser/writer
  • P5-chemistry-file-vrml - Generate VRML models for molecules
  • P5-chemistry-file-xyz - XYZ molecule format reader/writer
  • P5-chemistry-formulapattern - Match molecule by formula
  • P5-chemistry-internalcoords - Represent the position of an atom using internal coordinates
  • P5-chemistry-isotope - Table of the isotopes exact mass data
  • P5-chemistry-macromol - Perl toolkit to describe macromolecules
  • P5-chemistry-midaspattern - Select atoms in macromolecules
  • P5-chemistry-mok - Molecular awk interpreter
  • P5-chemistry-mol - Perl toolkit to describe molecules
  • P5-chemistry-pattern - Chemical substructure pattern matching
  • P5-chemistry-reaction - Represent a ring as a substructure of a molecule
  • P5-chemistry-ring - Represent a ring as a substructure of a molecule
  • P5-geo-bufr - Perl extension for handling of WMO BUFR files
  • P5-geo-coordinates-converter-iarea - Some utility functions around iArea
  • P5-geo-coordinates-converter - Simple converter of geo coordinates
  • P5-geo-readgrib - Perl module provides read access to GRIB files
  • P5-geo-webservice-elevation-usgs - Perl extension for elevation queries against USGS web services
  • P5-mcstas-tools - Perl based tools for the McStas neutron ray tracing package
  • P5-perlmol - Perl modules for molecular chemistry
  • P5-physics-unit - Manipulate Physics units and dimensions
  • Paje - Generic visualization tool for GNUstep (Gantt chart and more)
  • Paraview - Powerful scientific data visualization application
  • Pcmsolver - API for the Polarizable Continuum Model
  • Pnetcdf - Library providing high-performance I/O
  • Psychopy - Psychophysics toolkit for Python
  • Pulseview - GUI client that supports various hardware logic analyzers
  • Py-dendropy - Phylogenetic computing library
  • Py-mdanalysis - Python library to analyze molecular dynamics trajectories
  • Py-mdanalysistests - Test code and the trajectory data for test cases of MDAnalysis
  • Py-openfermion - Electronic structure package for quantum computers
  • Py-cdo - Python binding to CDO (Climate Data Operators)
  • Py-coards - COARDS compliant time parser
  • Py-dlib - Machine learning framework written in C++ (python bindings)
  • Py-gsd - GSD (General Simulation Data) file format for Python
  • Py-h5py - General-purpose Python interface to the HDF5 library
  • Py-hcluster - Hierarchical Clustering Package For Scipy
  • Py-mdp - Modular toolkit for Data Processing
  • Py-mlpy - High performance Python package for predictive modeling
  • Py-mmtf-python - MMTF (Macromolecular Transmission Format) Python API
  • Py-netcdf4 - Python Interface to the NetCDF Library (versions 3 and 4)
  • Py-obspy - Python framework for seismological observatories
  • Py-openpiv - Python module for Particle Image Velocimetry
  • Py-paida - Pure Python scientific analysis package
  • Py-pupynere - NetCDF file reader and writer
  • Py-pyaixi - Implementation of the MC-AIXI-CTW AI algorithm
  • Py-pydicom - Read, modify, and write DICOM files with Python code
  • Py-pymol - OpenGL-based molecular visualization system
  • Py-pyosf - Python lib for synching with OpenScienceFramework projects
  • Py-pysal - Cross-platform library of spatial analysis functions
  • Py-pyteomics.biolccc - Python bindings for BioLCCC
  • Py-pyteomics - Python modules for proteomics data analysis
  • Py-qspin - Learn quantum spin and entanglement
  • Py-quantities - Support for physical quantities with units, based on numpy
  • Py-scikit-fuzzy - Fuzzy logic toolkit for SciPy
  • Py-scikit-learn - Machine learning algorithms for python
  • Py-scikit-sparse - Sparse matrix package
  • Py-scimath - Scientific and Mathematical calculations
  • Py-scipy - Scientific tools for Python
  • Py-scoria - Lightweight molecule manipulation codebase
  • Py-tensorflow - Computation using data flow graphs for scalable machine learning
  • Py-veusz - Scientific plotting package
  • Py-ws2300 - Driver for the LaCrosse WS-2300 weather station
  • Pybrain - PyBrain is the swiss army knife for neural networking
  • Pycdf - Python Interface to the Unidata NetCDF Library
  • Pynn - Simulator-independent language for building neuronal network models
  • Qcl - Quantum computer simulator
  • Qtresistors - Calculate resistance of resistor by the colors on the resistor
  • Rdkit - Collection of cheminformatics and machine-learning software
  • Rubygem-ai4r - Various Ruby artificial intelligence algorithm implementations
  • Rubygem-cdo - Ruby binding to CDO (Climate Data Operators)
  • Rubygem-rgeo-geojson - GeoJSON formatting and parsing in Ruby
  • Rubygem-rgeo-proj4 - Proj.4 extension for RGeo
  • Rubygem-rgeo-shapefile - RGeo module for reading the ESRI shapefile format
  • Rubygem-rgeo - Geospatial data library for Ruby (RGeo)
  • Rubygem-ruby-dcl - Ruby interface to the scientific graphic library DCL
  • Rubygem-ruby-netcdf - Ruby interface to the NetCDF scientific IO library
  • Sigrok-cli - Framework for hardware logic analyzers, CLI client
  • Sigrok-firmware-fx2lafw - Cypress FX2 firmware for hardware logic analyzers
  • Sigrok-firmware-utils - Sigrok firmware extraction utils
  • Sigrok-firmware - Sigrok firmware
  • Silo - Mesh and field I/O library and scientific database
  • Simlib - SIMulation LIBrary for C++ programming language
  • Simsmith - A Java-based Smith Chart program
  • Step-kde4 - KDE 4 interactive physics simulator
  • Step - KDE interactive physics simulator
  • Svmlight - Implementation of Support Vector Machines (SVMs) in C
  • Szip - Lossless compression library for scientific data
  • Tfel - Code generation tool dedicated to material knowledge
  • Udunits - Library for manipulating units of physical quantities
  • Vmd - Molecular visualization program
  • Voro++ - Three-dimensional computations of the Voronoi tessellation
  • Xfce4-equake-plugin - Earthquake monitor plugin for the Xfce panel
  • Xmakemol - Molecule Viewer Program Based on Motif Widget